PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ORGLA09G0105100.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bHLH
Protein Properties Length: 452aa    MW: 47929.4 Da    PI: 6.055
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ORGLA09G0105100.1genomeAGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.61.2e-09280328355
                        HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                         +h+ +Er RR++i +++  L++l+P +    sk   Ka +L + ++Y++sLq
  ORGLA09G0105100.1 280 NSHSLAERLRREKISERMKLLQDLVPGC----SKVTGKAVMLDEIINYVQSLQ 328
                        58*************************9....556*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000833.29E-11275332No hitNo description
SuperFamilySSF474596.8E-17275345IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.65277327IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.6E-16278344IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000106.5E-7280328IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003535.2E-11283333IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 452 aa     Download sequence    Send to blast
MLCSAGYYYA LGIRSLEPRL GDSMDMSESS EKGMESNASP GPGNGIPVEW QSQFSSAFAC  60
QPSVAAQHQQ HAMMDSFAVA SAGLWASSDV VSAMSSAAPP RGAGFLAPVP GFLQQGLGHF  120
PVDSGFIERA ARSTCFGGGM MAGGPYGAAD QAMGDAFGGT AEGLMDHHRN VGNDKAEEFA  180
GNGHDEVPSS EVAGGDCSSI GSDSKKRRRP NEVMGTDQVH SSNLPSDSAN ESAHSKDKGE  240
ESSPATTNGG KSKGKGAKET SESQKEEYIH VRARRGQATN SHSLAERLRR EKISERMKLL  300
QDLVPGCSKV TGKAVMLDEI INYVQSLQRQ VEFLSMKLAT VNPRLDLNIE GLLSKDLLRF  360
PGVPSSSIGF SPEMMHPQLQ LSQPGLIHGG TAGMANPDVF RRIIQAQLGA KDGSQQMPHS  420
LNGSFSDVSQ MAYPSLGSQD LSIRPSQDGF QM
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK1214180.0AK121418.1 Oryza sativa Japonica Group cDNA clone:J023133H05, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015612415.10.0PREDICTED: transcription factor bHLH49 isoform X1
SwissprotQ9CAA93e-70BH049_ARATH; Transcription factor bHLH49
TrEMBLI1QPS20.0I1QPS2_ORYGL; Uncharacterized protein
STRINGORGLA09G0105100.10.0(Oryza glaberrima)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP29093785
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68920.33e-69bHLH family protein